Hi Chris,
You should be able to install make either from Apple's developer tools
or from Fink (using FinkCommander if you like a graphical interface).
Good luck,
Kosuke
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On Mon, 7 Nov 2005, Olivia Lau wrote:
> ---------- Forwarded message ----------
> Date: Mon, 7 Nov 2005 11:44:45 -0600
> From: Chris Haid <haid(a)uchicago.edu>
> To: Olivia Lau <olau(a)fas.harvard.edu>
> Subject: Re: VGAM install problems
>
> I believe I have downloaded the g77 compiler correctly (it is installed
> in usr/local, I believe). Still no luck on compiling VGAM from
> scratch. I get an error on a 'make' command, which leads me to believe
> that the I need the apple developer tools. Any idea if these can be
> downloaded and installed, and for that matter which set of tools I
> would need?
>
> On the VGAM install error, here is what I get back from the system
> after running R CMD INSTALL VGAM_0.6-5.tar.gz from a unix command line:
>
> wireless-198-24:~/Desktop chrishaid$ R CMD INSTALL VGAM_0.6-5.tar.gz
> * Installing *source* package 'VGAM' ...
> ** libs
> /Library/Frameworks/R.framework/Resources/bin/SHLIB: line 1: make:
> command not found
> ERROR: compilation failed for package 'VGAM'
> ** Removing
> '/Library/Frameworks/R.framework/Versions/2.2/Resources/library/VGAM'
>
>
> Thoughts?
>
> c
>
> On Nov 7, 2005, at 10:26 AM, Olivia Lau wrote:
>
> > Dear Chris,
> >
> > I've asked Thomas to create the appropriate directories on his website
> > so that the script will work in the future -- thanks for bringing this
> > to our (collective) attention.
> >
> > In the meanwhile, you can compile VGAM from scratch (as you attempted
> > below). You need to have the g77 compiler installed, however, for
> > this to work. See
> > http://gking.harvard.edu/zelig/docs/Why_can_t_I.html (the second
> > bullet) for how to do this. You might also need to have the Apple
> > developer tools installed -- I'm not sure for 10.3.9, but some
> > versions give you the option of not installing the tools when you
> > first startup.
> >
> > Hope this helps. Best,
> >
> > Olivia
> >
> > ----- Original Message ----- From: "Chris Haid" <haid(a)uchicago.edu>
> > To: "Thomas Yee" <t.yee(a)auckland.ac.nz>
> > Cc: <olau(a)fas.harvard.edu>
> > Sent: Monday, November 07, 2005 8:30 AM
> > Subject: Re: VGAM install problems
> >
> >
> >> Thanks for the quick reply, Thomas. I am cc'ing olivia on this eamil
> >>
> >> No luck. I am still getting the 404 Not Found error when I run either:
> >> o the zelig install
> >> (source("http://gking.harvard.edu/zelig/install.R")) or
> >> o the VGAM install (install.packages("VGAM",
> >> repos="http://www.stat.auckland.ac.nz/~yee").
> >>
> >>
> >> Olivia, do you have any ideas (see emails below).
> >>
> >> All the best,
> >>
> >> Chris Haid
> >>
> >> On Nov 6, 2005, at 10:20 PM, Thomas Yee wrote:
> >>
> >>> Chris Haid wrote:
> >>>
> >>>>
> >>>> Prof. Yee--
> >>>>
> >>>> Installing VGAM (to use with Gary King's Zelig) has been giving me
> >>>> fits.
> >>>>
> >>>> Original install from Zelig install failed.
> >>>>
> >>>> Trying to install VGAM form within R with (install.packages("VGAM",
> >>>> repos="http://www.stat.auckland.ac.nz/~yee"), fails with these
> >>>> errrors:
> >>>> Warning message:
> >>>> cannot open: HTTP status was '404 Not Found'
> >>>> Warning: unable to access index for repository
> >>>> http://www.stat.auckland.ac.nz/~yee/bin/macosx/2.1
> >>>> Warning message:
> >>>> no package 'VGAM' at the repositories in: download.packages(pkgs,
> >>>> destdir = tmpd, available = available,
> >>>>
> >>>>
> >>>> Downloading VGAM and running R CMD INSTALL VGAM yields:
> >>>> * Installing *source* package 'VGAM' ...
> >>>> ** libs
> >>>> /Library/Frameworks/R.framework/Resources/bin/SHLIB: line 1: make:
> >>>> command not found
> >>>> ERROR: compilation failed for package 'VGAM'
> >>>> ** Removing
> >>>> '/Library/Frameworks/R.framework/Versions/2.1.1/Resources/library/
> >>>> VGAM'
> >>>> ** Restoring previous
> >>>> '/Library/Frameworks/R.framework/Versions/2.1.1/Resources/library/
> >>>> VGAM'
> >>>>
> >>>>
> >>>> I am running Mac OS X 10.3.9 on an iBook G4
> >>>>
> >>>> Any thoughts?
> >>>>
> >>>> All the best,
> >>>>
> >>>> Chris Haid
> >>>> --Apple-Mail-18-536593605
> >>>> Content-Transfer-Encoding: 7bit
> >>>> Content-Type: text/enriched;
> >>>> charset=US-ASCII
> >>>>
> >>>> Prof. Yee--
> >>>>
> >>>>
> >>>> Installing VGAM (to use with Gary King's Zelig) has been giving me
> >>>> fits.
> >>>>
> >>>>
> >>>> Original install from Zelig install failed.
> >>>>
> >>>>
> >>>> Trying to install VGAM form within R with
> >>>> (<fontfamily><param>Courier</param><x-tad-
> >>>> bigger>install.packages("VGAM",
> >>>> repos="http://www.stat.auckland.ac.nz/~yee"), fails with these
> >>>> errrors:
> >>>>
> >>>> Warning message:
> >>>>
> >>>> cannot open: HTTP status was '404 Not Found'
> >>>>
> >>>> Warning: unable to access index for repository
> >>>> http://www.stat.auckland.ac.nz/~yee/bin/macosx/2.1
> >>>>
> >>>> Warning message:
> >>>>
> >>>> no package 'VGAM' at the repositories in: download.packages(pkgs,
> >>>> destdir = tmpd, available = available, </x-tad-bigger></fontfamily>
> >>>>
> >>>>
> >>>>
> >>>> Downloading VGAM and running R CMD INSTALL VGAM yields:
> >>>>
> >>>> * Installing *source* package 'VGAM' ...
> >>>>
> >>>> ** libs
> >>>>
> >>>> /Library/Frameworks/R.framework/Resources/bin/SHLIB: line 1: make:
> >>>> command not found
> >>>>
> >>>> ERROR: compilation failed for package 'VGAM'
> >>>>
> >>>> ** Removing
> >>>> '/Library/Frameworks/R.framework/Versions/2.1.1/Resources/library/
> >>>> VGAM'
> >>>>
> >>>> ** Restoring previous
> >>>> '/Library/Frameworks/R.framework/Versions/2.1.1/Resources/library/
> >>>> VGAM'
> >>>>
> >>>>
> >>>>
> >>>> I am running Mac OS X 10.3.9 on an iBook G4
> >>>>
> >>>>
> >>>> Any thoughts?
> >>>>
> >>>>
> >>>> All the best,
> >>>>
> >>>>
> >>>> Chris Haid
> >>>>
> >>> Dear Chris,
> >>>
> >>> sorry I'm not sure about the cause of your problem.
> >>> Maybe the Auckland server was down when you tried it.
> >>>
> >>> I think it may be because zelig wants version 0.6-4, which is a bit
> >>> old
> >>> (0.6-5 is the latest) and I changed the permissions of the old
> >>> version.
> >>> Anyhow, I've rechanged the permissions, so if that is the problem,
> >>> it should now work. Please try again!
> >>> If that doesn't work, then you might want to contact the zelig
> >>> group, e.g., Olivia Lau at olau(a)fas.harvard.edu, because it might
> >>> be a zelig problem.
> >>>
> >>> cheers
> >>>
> >>> Thomas
> >>>
> >>>
> >
>
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Hello
I can not seem to get a hold of the define.par,
define.data ... functions. Can somebody pls help?
Regards
Per Jensen
R : Copyright 2005, The R Foundation for Statistical
Computing
Version 2.1.1 (2005-06-20), ISBN 3-900051-07-0
R is free software and comes with ABSOLUTELY NO
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You are welcome to redistribute it under certain
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Type 'license()' or 'licence()' for distribution
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> library(Zelig)
Loading required package: MASS
Loading required package: boot
##
## Zelig (Version 2.4-5, built: 2005-10-18)
## Please refer to http://gking.harvard.edu/zelig for
full documentation
## or help.zelig() for help with commands and models
supported by Zelig.
##
> getAnywhere("define.data")
no object named define.data was found
> getAnywhere("define.par")
no object named define.par was found
> ?define.data
No documentation for 'define.data' in specified
packages and libraries:
you could try 'help.search("define.data")'
> define.data
Error: Object "define.data" not found
>
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Dear Zelig developers:
I'm fitting multinomial logit models with the "mlogit" model. I'd like to set a priori the values of some of the parameters of the model and not let the algorithm estimate them. Is that feasible with Zelig?
Thank you very much,
Alejandro Buren
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Dear Zelig developers,
I'm really glad this package is available for use, it's been really helpful.
I'm using the "mlogit" model to fit multinomial logit models.
I'd like to ask you which algorithm is Zelig implementing to maximize the loglikelihood, and if it's making any restriction (besides setting all the parameters of the baseline category to zero) to explore the parameter space.
I'm asking because I wrote a piece of Fortran code which fits a multinomial logit model and I'm running it with two different simulated annealing algorithms, one just goes crazy and declares it's not able to do the job for me and the second finds a maximum but it has two flaws: 1. it's not computationally efficient (i.e. one run takes forever) and 2. it's not consistent, i.e. it ends up in a different spot of the parameter space depending on where I start it.
I've seen that the algorithm Zelig implements doesn't have these flaws and besides it yields almost identical (even better!) results than SAS.
My big concern is that I must get my Fortran code to work because it is just a subroutine of an ad-hoc simulation I'm trying to run.
Thanks a lot,
Alejandro
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Generalized boosted regression model (gbm) would be a very nice addition
to Zelig.
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